Oh I forgot about this topic I figured this out for the most part everything you said I got and i am using a script that allows you to set variables and switches to be carried over when new game is selected so that I can imitate the actual KHBBS story system. So I can remove them at the end of thier story then when all three stories are complete once you press new game again it will give you the option to play the final story. Then once the final story is loaded then I will load the latest removed character data for the final story. But this would be a problem since I give people as many saves as they want and when they start a new game I would have to click initialize which would ruin this but I found a special character select script that I can hopefully get modified that will overwrite this method by when the actor is chosen the script will start them out with their base graphics with out initializing them.
So what I really need now to complete this perfect imitation of the KHBBS story system is someone to modify this character select script to where it will start the character with their base stats without initializing them.
The character select script can be found here http://www.atelier-rgss.com/RGSS/Menu/ACE_Menu07.html
Thanks for the help.